National Draft
| Round | Pick | Player | Recruited from | Club |
| Priority | 1 | Josh Fraser | Murray Bushrangers | Collingwood |
| Priority | 2 | Paul Hasleby | East Fremantle | Fremantle |
| 1 | 3 | Aaron Fiora | Port Adelaide Magpies | Richmond |
| 1 | 4 | Matthew Pavlich | Woodville-West Torrens | Fremantle |
| 1 | 5 | Leigh Brown | Gippsland Power | Fremantle |
| 1 | 6 | Damian Cupido | Eastern Ranges | Brisbane Lions |
| 1 | 7 | Danny Roach | Tassie Mariners | Collingwood |
| 1 | 8 | Joel Corey | East Perth | Geelong |
| 1 | 9 | Caydn Beetham | Oakleigh Chargers | St Kilda |
| 1 | 10 | Luke McPharlin | East Fremantle | Hawthorn |
| 1 | 11 | Darren Glass | Perth | West Coast Eagles |
| 1 | 12 | Paul Koulouriotis | Calder Cannons | Port Adelaide |
| 1 | 13 | Robert Murphy | Gippsland Power | Western Bulldogs |
| 1 | 14 | Travis Gaspar | South Fremantle | West Coast Eagles |
| 1 | 15 | David Spriggs | Prahran Dragons | Geelong |
| 1 | 16 | David Haynes | Geelong Falcons | West Coast Eagles |
| 1 | 17 | Ezra Bray | Calder Cannons | Geelong |
| 2 | 18 (F/S) | Rhyce Shaw | Preston Knights | Collingwood |
| 2 | 19 | Brad Green | Tassie Mariners | Melbourne |
| 2 | 20 | Paul Wheatley | Preston Knights | Melbourne |
| 2 | 21 | Scott Stevens | Perth | Sydney |
| 2 | 22 | Ezra Poyas | Prahran Dragons | Richmond |
| 2 | 23 | Daniel Foster | Port Adelaide | Geelong |
| 2 | 24 | Jason Blake | Prahran Dragons | St Kilda |
| 2 | 25 | Brett Johnson | Swan Districts | Hawthorn |
| 2 | 26 (F/S) | Stephen Doyle | South Adelaide | Sydney |
| 2 | 27 | Cain Ackland | Port Adelaide | Port Adelaide |
| 2 | 28 | Brent Guerra | Bendigo Pioneers | Port Adelaide |
| 2 | 29 | Adam Hunter | Swan Districts | West Coast Eagles |
| 2 | 30 (F/S) | Jonathan Brown | Geelong Falcons | Brisbane Lions |
| 2 | 31 | Paul Chapman | Calder Cannons | Geelong |
| 2 | 32 | Daniel Giansiracusa | Western Jets | Western Bulldogs |
| 2 | 33 | Tim Clarke | Geelong Falcons | Hawthorn |
| 2 | 34 | Leon Davis | Perth | Collingwood |
| 3 | 35 | Patrick Wiggins | Tassie Mariners | Western Bulldogs |
| 3 | 36 | Rhett Biglands | Woodville-West Torrens | Adelaide |
| 3 | 37 | Mitch Hahn | Northern Eagles | Western Bulldogs |
| 3 | 38 | Cameron Ling | Geelong Falcons | Geelong |
| 3 | 39 | Scott Homewood | Eastern Ranges | Richmond |
| 3 | 40 | David Hille | Dandenong Stingrays | Essendon |
| 3 | 41 | Kane Munro | Bendigo Pioneers | West Coast Eagles |
| 3 | 42 | Michael Clark | Eastern Ranges | Melbourne |
| 3 | 43 | Lindsay Gilbee | Eastern Ranges | Western Bulldogs |
| 3 | 44 (F/S) | Shane Morrison | Northern Eagles | Brisbane Lions |
| 3 | 45 | Marcus Pickett | Port Adelaide | Essendon |
| 3 | 46 | Adam Butler | Murray Bushrangers | Fremantle |
| 3 | 47 | Corey Enright | Port Adelaide | Geelong |
| 3 | 48 | Chance Bateman | Perth | Hawthorn |
| 3 | 49 | Ben Cunningham | Claremont | Fremantle |
| 3 | 50 | Matthew Whelan | Woodville-West Torrens | Melbourne |
| 4 | 51 | Ricky O'Loughlin | Port Adelaide | Adelaide |
| 4 | 52 | Andrew Mills | Murray Bushrangers | Richmond |
| 4 | 53 | Clayton Lassock | West Perth | Kangaroos |
| 4 | 54 | Murray Pitts | St Kilda Reserves | St Kilda |
| 4 | 55 | Tim Hazell | Southern Districts | Hawthorn |
| 4 | 56 | Ryan O'Keefe | Calder Cannons | Sydney |
| 4 | 57 | Steven Brosnan | Port Adelaide | Port Adelaide |
| 4 | 58 | Patrick Bowden | Rovers | Western Bulldogs |
| 4 | 59 | John Barnes | Geelong | Essendon |
| 4 | 60 | Richard Kelly | Perth | Carlton |
| 4 | 61 | Mark Ainley | Prahran Dragons | Kangaroos |
| 4 | 62 | Ben Johnson | Preston Knights | Collingwood |
| 4 | 63 | Shannon O'Brien | Gippsland Power | Melbourne |
| 4 | 64 | Cameron Bruce | Melbourne Reserves | Melbourne |
| 4 | 65 | Justin Cicolella | Woodville-West Torrens | Adelaide |
| 4 | 66 | Ryan Hargrave | Perth | Western Bulldogs |
| 5 | 67 | Robert Shirley | Woodville-West Torrens | Adelaide |
| 5 | 68 | Tony Delaney | Fremantle | St Kilda |
| 5 | 69 | Bill Nicholls | Geelong Falcons | Hawthorn |
| 5 | 70 | Brett Allison | Kangaroos | Sydney |
| 5 | 71 | Not utilised | – | Port Adelaide |
| 5 | 72 | Robert Forster-Knight | Murray Bushrangers | Essendon |
| 5 | 73 | Ryan Houlihan | Murray Bushrangers | Carlton |
| 5 | 74 | Matthew Burton | Fremantle | Kangaroos |
| 5 | 75 | Dale Baynes | East Fremantle | Collingwood |
| 5 | 76 | Not utilised | – | Fremantle |
| 5 | 77 | Lindsay Smith | Glenelg | Kangaroos |
| 5 | 78 | Ty Zantuck | Western Jets | Richmond |
| 5 | 79 | Balraj Singh | West Adelaide | Adelaide |
| 5 | 80 | Jeremy Dukes | Prahran Dragons | Carlton |
| 5 | 81 | Troy Makepeace | Kangaroos Reserves | Kangaroos |
| 5 | 82 | Nick Stone | Prahran Dragons | Collingwood |
| 6 | 83 | Matthew Shir | Murray Bushrangers | Adelaide |
| 6 | 84 | Not utilised | – | Richmond |
| 6 | 85 | Not utilised | – | Hawthorn |
| 6 | 86 | Trent Hotton | East Burwood | Carlton |
| 6 | 87 | Christian Woodley | Subiaco | Kangaroos |
| 6 | 88 | Michael W. Clark | Fremantle | Collingwood |
| 6 | 89 | Not utilised | – | Adelaide |
| 6 | 90 | Andrew Merrington | St Bernards | Carlton |
| 6 | 91 | Not utilised | – | Adelaide |
| 6 | 92 | Adam Mathews | Murray Bushrangers | Carlton |
| 6 | 93 | Joe Allen | Gippsland Power | Carlton |
Read more about this topic: 1999 AFL Draft
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