Alphabetically
- Baker Creek
- Bennetts River
- Big Piney River
- Big River (142 miles)
- Big Sugar Creek
- Black River (300 miles)
- Blackwater River (55 miles)
- Blue River
- Bourbeuse River (147 miles)
- Brush Creek
- Cache River (213 miles)
- Capps Creek
- Castor River
- Chariton River (280 miles)
- Courtois Creek
- Crane Creek
- Crooked River (60 miles)
- Cuivre River
- Current River (225 miles)
- Des Moines River (525 miles)
- Eleven Point River
- Elk River (80 miles)
- Fabius River (230 miles)
- Fishing River
- Fox River
- Gasconade River (265 miles)
- Grand River (226 miles)
- Grandglaize Creek
- Green River
- Huzzah Creek
- Jacks Fork
- James River
- Kings River
- Lamine River (70 miles)
- Little Black River
- Little Blue River
- Little Bourbeuse River
- Little Chariton River
- Little Fabius River
- Little Fox River
- Little Maries River
- Little Meramec River
- Little Niangua River (40 miles)
- Little Osage River
- Little Platte River
- Little Pomme de Terre River
- Little River (Iowa–Missouri), tributary of Weldon River
- Little River (St. Francis River)
- Little Sac River
- Little St. Francis River
- Little Sugar Creek
- Little Wyaconda River
- Locust Creek
- Loutre River
- Marais des Cygnes River (140 miles)
- Maries River
- Marmaton River
- Meramec River
- Middle River
- Missouri River
- Mississippi River
- Moreau River
- Niangua River
- Nishnabotna River
- Nodaway River
- North Dry Sac River
- North Fork River
- North River
- One Hundred and Two River
- Old River
- Osage River
- Platte River
- Pomme de Terre River (113 miles)
- River des Peres
- Roaring River
- Roubidoux Creek
- Sac River (107 miles)
- St. Francis River (470 miles)
- Salt River
- Shoal Creek
- South Grand River
- South River
- Spring River (Arkansas), of Missouri and Arkansas (57 mile)
- Spring River (Missouri), of Missouri, Kansas and Oklahoma
- Squaw Creek
- Tarkio River
- Thompson River
- Weldon River
- White River (722 miles)
- Whitewater River
- Wilsons Creek
- Wyaconda River
Read more about this topic: List Of Rivers Of Missouri