Stone was so upset at the failure to renew his contract and the move to the SCG that he stood against St. George President Danny Robinson, losing by one vote. He played for Picton in Country League as captain-coach and coached the Western Suburbs Magpies reserve grade side.
In 2000, the St. George Committee including Robinson asked him to return to St. George as the Chief Executive to protect the proud history of the club in the joint venture with the Illawarra Steelers. Stone played a critical role in organising the return of St. George Illawarra to OKI Jubilee Oval in Kogarah in 2003 including organising the rejuvenation of the ground. The area where former great players of the Dragons congregate to watch the match is known as "Stoney's slab" as recognition of his role in redeveloping the ground.
Robert Stone was also involved in the decision by the Australian Labor Party to select Mark Latham as its new leader in 2003. Robert McClelland was a crucial vote in the battle between Latham and Kim Beazley. On 3 December, Latham suggested that McClelland call Stone who was his childhood friend and who Latham knew casually as a St. George fan. McClelland called Stone who advised him to vote for Latham as "Putting Beazley back in again would be like putting me into a first-grade team again. I'd be massacred.You have to move on and try something different." Robert McClelland voted for Latham with Stone's advice being one of the critical factors in his decision which led to Latham being elected voter by one vote.
Stone was diagnosed with a brain tumor and fell into a coma in late July 2005. He died from the tumor on 1 August.
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