Software
CLC bio develops widely cited desktop and backend server software for analysis of biological data. While offering some open source algorithms with their tools, CLC bio have their own implementations of several popular applications, which have been accelerated using SIMD technology.
Among other features, the software supports read mapping of Sanger and high-throughput sequencing data, De novo assembly of Sanger and high-throughput sequencing data, SNP detection on whole genomes of any size, detection of structural variations on whole genomes of any size, ChIP-seq analysis, RNA-Seq analysis, Small RNA analysis and BLAST.
CLC bio's software allows the user to analyze, visualize, and compare genomic, transcriptomic, and epigenomic data from all major high-throughput sequencing platforms such as Illumina, Life Technologies, Roche 454, Pacific Biosciences, and Complete Genomics. CLC bio's software is platform independent and can be used for both Mac OS X, Windows, and Linux.
CLC bio’s analysis platform has been installed at several of the world’s premier research institutions and at more than 2000 different organizations around the globe, including the top 10 pharmaceutical companies in the world.
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