Cell Lists

Cell lists (also sometimes referred to as Cell linked-lists) are a tool for finding all atom pairs within a given cut-off distance of each other in Molecular dynamics simulations. These pairs are needed to compute the short-range non-bonded interactions in a system, such as Van der Waals forces or the short-range part of the electrostatic interaction when using Ewald summation.

Read more about Cell Lists:  Algorithm, Periodic Boundary Conditions, Improvements

Famous quotes containing the words cell and/or lists:

    I turn and turn in my cell like a fly that doesn’t know where to die.
    Antonio Gramsci (1891–1937)

    Behold then Septimus Dodge returning to Dodge-town victorious. Not crowned with laurel, it is true, but wreathed in lists of things he has seen and sucked dry. Seen and sucked dry, you know: Venus de Milo, the Rhine or the Coloseum: swallowed like so many clams, and left the shells.
    —D.H. (David Herbert)