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- Waldo, Florida (WDO)
- Waldoboro, Maine (WDR)
- Wallace, North Carolina (WCE)
- Wallingford, Connecticut (WFD)
- Walloon Lake, Michigan (WNK)
- Walnut Ridge, Arkansas (WNR)
- Warrensburg, Missouri (WAR)
- Warrenton, Oregon (WNT)
- Warrenton, Virginia (WON)
- Wasco, California (WAC)
- Washington, D.C (WAS) (Union Station)
- Washington, Missouri (WAH) (Amtrak Station)
- Waterbury, Vermont (WAB) (Amtrak station)
- Waterloo, Indiana (WTI) (Amtrak station)
- Waupaca, Wisconsin (WAU) Thruway Motorcoach stop
- Wausau, Wisconsin (WSU) Thruway Motorcoach stop
- Wells, Maine (WEM) (Wells Regional Transportation Center)
- Wenatchee, Washington (WEN) (Columbia Station)
- West Corona, California (WCO) (Amtrak Station)
- West Glacier, Montana (WGL)
- West Palm Beach, Florida (WPB) (Tri-Rail Station)
- Westerly, Rhode Island (WLY)
- Westport, New York (WSP) (Amtrak station)
- Westwood, Massachusetts RTE (Amtrak station)
- Wheatland, Wyoming (WHT) Thruway Motorcoach stop
- Whistler, British Columbia (WSL) Thruway Motorcoach stop
- White City, Oregon (WCT) Thruway Motorcoach stop
- White River Junction, Vermont (WRJ)
- White Sulphur Springs, West Virginia (WSS)
- Whitefish, Montana (WFH) (Amtrak station)
- Whitehall, New York (WHL) (Amtrak station)
- Wildwood, Florida (WWD) Thruway Motorcoach stop
- Williams, Arizona (WMA) Thruway Motorcoach stop
- Williams Junction, Arizona (WMJ)
- Williamsburg, Virginia (WBG) (Amtrak station)
- Williston, North Dakota (WTN) (Amtrak station)
- Willits, California (WTS) Thruway Motorcoach stop
- Wilmington, Delaware (WIL) (Amtrak-SEPTA station)
- Wilmington, North Carolina (WMN) Thruway Motorcoach stop
- Wilson, North Carolina (WLN) (Amtrak station)
- Windsor, Connecticut (WND) (Amtrak station)
- Windsor, Vermont (WNM) (Amtrak station)
- Windsor Locks, Connecticut (WNL) (Amtrak station)
- Winnemucca, Nevada (WNN) (Amtrak station)
- Winona, Minnesota (WIN) (Amtrak station)
- Winslow, Arizona (WLO) (Amtrak station)
- Winston-Salem, North Carolina (WNS) Winston-Salem Transportation Center Thruway Motorcoach stop
- Winter Haven, Florida (WTH) (Amtrak station)
- Winter Park, Florida (WPK) (Amtrak station)
- Wiscasset, Maine (WST) Thruway Motorcoach stop
- Wisconsin Dells, Wisconsin (WDL) (Amtrak station)
- Wishram, Washington(WIH) (Amtrak station)
- Wittenberg, Wisconsin (WIT)
- Woburn, Massachusetts (WOB) (Anderson Regional Transportation Center)
- Wolf Point, Montana (WPT) (Amtrak station)
- Woodbridge, Virginia (WDB) (Amtrak station)
- Worcester, Massachusetts (WOR) (Union Station)
Read more about this topic: Amtrak Stations