125cc Classification
| Pos | No | Driver | Manufacturer | Laps | Time/Retired | Grid | Points |
|---|---|---|---|---|---|---|---|
| 1 | 36 | Mika Kallio | KTM | 21 | 41:40.970 | 2 | 25 |
| 2 | 19 | Álvaro Bautista | Aprilia | 21 | +0.185 | 1 | 20 |
| 3 | 60 | Julián Simón | KTM | 21 | +7.769 | 4 | 16 |
| 4 | 75 | Mattia Pasini | Aprilia | 21 | +7.907 | 7 | 13 |
| 5 | 52 | Lukáš Pešek | Derbi | 21 | +7.924 | 6 | 11 |
| 6 | 55 | Héctor Faubel | Aprilia | 21 | +8.078 | 3 | 10 |
| 7 | 71 | Tomoyoshi Koyama | Malaguti | 21 | +22.782 | 10 | 9 |
| 8 | 38 | Bradley Smith | Honda | 21 | +22.911 | 9 | 8 |
| 9 | 14 | Gábor Talmácsi | Honda | 21 | +23.192 | 12 | 7 |
| 10 | 18 | Nicolás Terol | Derbi | 21 | +32.403 | 18 | 6 |
| 11 | 32 | Fabrizio Lai | Aprilia | 21 | +39.590 | 11 | 5 |
| 12 | 34 | Esteve Rabat | Honda | 21 | +39.735 | 21 | 4 |
| 13 | 44 | Karel Abraham | Aprilia | 21 | +39.817 | 23 | 3 |
| 14 | 11 | Sandro Cortese | Honda | 21 | +40.011 | 14 | 2 |
| 15 | 90 | Hiroaki Kuzuhara | Aprilia | 21 | +40.135 | 17 | 1 |
| 16 | 53 | Simone Grotzkyj | Aprilia | 21 | +43.213 | 27 | |
| 17 | 26 | Vincent Braillard | Aprilia | 21 | +49.105 | 29 | |
| 18 | 20 | Roberto Tamburini | Aprilia | 21 | +54.960 | 26 | |
| 19 | 42 | Pol Espargaró | Derbi | 21 | +55.641 | 20 | |
| 20 | 33 | Sergio Gadea | Aprilia | 21 | +55.673 | 5 | |
| 21 | 87 | Roberto Lacalendola | Aprilia | 21 | +1:06.921 | 34 | |
| 22 | 67 | Blake Leigh-Smith | KTM | 21 | +1:07.536 | 33 | |
| 23 | 9 | Michael Ranseder | KTM | 21 | +1:07.695 | 28 | |
| 24 | 43 | Manuel Hernández | Honda | 21 | +1:08.696 | 30 | |
| 25 | 45 | Imre Tóth | Aprilia | 21 | +1:14.767 | 25 | |
| 26 | 13 | Dino Lombardi | Aprilia | 21 | +1:17.503 | 40 | |
| 27 | 50 | Hiroomi Iwata | Honda | 21 | +1:18.114 | 32 | |
| 28 | 16 | Michele Conti | Honda | 21 | +1:20.465 | 36 | |
| 29 | 37 | Joey Litjens | Honda | 21 | +1:23.274 | 39 | |
| 30 | 48 | Toshihisa Kuzuhara | Honda | 21 | +1:23.653 | 37 | |
| 31 | 51 | Iori Namihira | Honda | 21 | +1:24.235 | 38 | |
| Ret | 49 | Kazuma Watanabe | Honda | 20 | Accident | 31 | |
| Ret | 12 | Federico Sandi | Aprilia | 17 | 22 | ||
| Ret | 6 | Joan Olivé | Aprilia | 12 | 19 | ||
| Ret | 8 | Lorenzo Zanetti | Aprilia | 9 | 15 | ||
| Ret | 47 | Shoya Tomizawa | Honda | 8 | 35 | ||
| Ret | 35 | Raffaele de Rosa | Aprilia | 5 | 16 | ||
| Ret | 1 | Thomas Lüthi | Honda | 3 | Accident | 8 | |
| Ret | 63 | Mike di Meglio | Honda | 3 | Accident | 13 | |
| Ret | 73 | Kazuya Otani | Malaguti | 2 | 24 | ||
| DNQ | 24 | Simone Corsi | Gilera | ||||
| OFFICIAL 125cc REPORT | |||||||
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Read more about this topic: 2006 Japanese Motorcycle Grand Prix