Finals
| Team 1 | Agg. | Team 2 | 1st leg | 2nd leg |
|---|---|---|---|---|
| SV Pasching | 0–2 | FC Schalke 04 | 0–2 | 0–0 |
| SC Heerenveen | 1–2 | Villarreal CF | 1–2 | 0–0 |
| Perugia Calcio | 3–0 | VfL Wolfsburg | 1–0 | 2–0 |
Read more about this topic: 2003 UEFA Intertoto Cup
Finals
| Team 1 | Agg. | Team 2 | 1st leg | 2nd leg |
|---|---|---|---|---|
| SV Pasching | 0–2 | FC Schalke 04 | 0–2 | 0–0 |
| SC Heerenveen | 1–2 | Villarreal CF | 1–2 | 0–0 |
| Perugia Calcio | 3–0 | VfL Wolfsburg | 1–0 | 2–0 |
Read more about this topic: 2003 UEFA Intertoto Cup