First Round
The first round first legs were played on 13–15 March, and the second legs on 3–6 April 2009.
| Team 1 | Agg. | Team 2 | 1st leg | 2nd leg |
|---|---|---|---|---|
| Primeiro de Agosto | 1–1 (5–4p) | Canon Yaoundé | 0–1 | 1–0 (aet) |
| AS Douanes | 1–1(a) | Kano Pillars | 1–1 | 0–0 |
| Club Africain | 2–2(a) | Djoliba | 1–2 | 1–0 |
| Kampala City Council | 3–2 | Supersport United | 2–1 | 1–1 |
| Heartland | 4–2 | FAR Rabat | 3–1 | 1–1 |
| TP Mazembe | 5–1 | Atlético Petróleos Luanda | 3–0 | 2–1 |
| ASEC Mimosas | 3–0 | Étoile Filante | 2–0 | 1–0 |
| JS Kabylie | 1–3 | Al Ahly Tripoli | 1–2 | 0–1 |
| Asante Kotoko | 3–3(a) | Ittihad Khemisset | 3–1 | 0–2 |
| Étoile Sportive du Sahel | 2–1 | ASO Chlef | 2–1 | 0–0 |
| Coton Sport FC | 5–3 | AS Mangasport | 2–1 | 3–2 |
| Ajax Cape Town | 4–4(a) | Monomotapa United | 3–2 | 1–2 |
| Al-Ahly | 4–0 | Young Africans | 3–0 | 1–0 |
| Al-Hilal | 4–3 | US Stade Tamponnaise | 3–1 | 1–2 |
| Africa Sports National | 0–2 | ZESCO United | 0–0 | 0–2 |
| Al Ittihad Tripoli | 1–4 | Al-Merreikh | 1–1 | 0–3 |
Read more about this topic: 2009 CAF Champions League
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