Solute Carrier Family - Nomenclature System

Nomenclature System

Names of individual SLC members have the following format:

  • SLCnXm

where:

  • SLC is the root name (SoLute Carrier)
  • n = an integer representing a family (e.g., 1-47)
  • X = a single letter (A, B, C, ...) denoting a subfamily
  • m = an integer representing an individual family member (isoform).

For example SLC1A1 is the first isoform of subfamily A of SLC family 1.

An exception occurs with SLC family 21 (the organic anion transporting polypeptide transporters), which for historical reasons have names in the format SLCOnXm where n = family number, X = subfamily letter, and m = member number.

While the HGNC nomenclature system by definition only includes human genes, the nomenclature system has been informally extended to include rodent species through the use of lowercase letters (e.g., Slc1a1 denotes the rodent ortholog of the human SLC1A1 gene).

Read more about this topic:  Solute Carrier Family

Famous quotes containing the word system:

    Columbus stood in his age as the pioneer of progress and enlightenment. The system of universal education is in our age the most prominent and salutary feature of the spirit of enlightenment, and it is peculiarly appropriate that the schools be made by the people the center of the day’s demonstration. Let the national flag float over every schoolhouse in the country and the exercises be such as shall impress upon our youth the patriotic duties of American citizenship.
    Benjamin Harrison (1833–1901)