Gorkha Airlines operates scheduled flights to the following domestic destinations (as of June 2010):
| Location served | IATA | Airport name | Destinations |
|---|---|---|---|
| Bhairahawa | BWA | Gautam Buddha Airport | Kathmandu |
| Bharatpur | BHR | Bharatpur Airport | Kathmandu |
| Biratnagar | BIR | Biratnagar Airport | Tumlingtar |
| Janakpur | JKR | Janakpur Airport | Kathmandu |
| Jomsom | JMO | Jomsom Airport | Pokhara |
| Kathmandu | KTM | Tribhuvan International Airport | Bhairahawa, Bharatpur, Janakpur, Lukla, Pokhara, Simara, Tumlingtar |
| Lukla | LUA | Tenzing-Hillary Airport | Kathmandu |
| Pokhara | PKR | Pokhara Airport | Jomsom, Kathmandu |
| Simara | SIF | Simara Airport | Kathmandu |
| Tumlingtar | TMI | Tumlingtar Airport | Biratnagar, Kathmandu |
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