Plot
In a dream-like sequence Dana Scully (Gillian Anderson) walks through a desert and picks up a gold cross necklace on the ground. Continuing from the previous episode, agent Fox Mulder (David Duchovny) arrives at the hospital in San Diego where Scully introduces him to Emily. Mulder tells Scully that Frohike has found that Emily's surrogate mother is a woman named Anna Fugazzi (slang for fake), and that there are no true records of how Emily came into the world. Mulder, along with Scully's family, attend a meeting regarding Emily's adoption at the San Diego Hall of Justice. Mulder tells the Judge that Emily was conceived from Scully's ova, which was taken from her during her abduction, which the Judge doubted on believing. Later, Scully receives an abandoned call from the County Children's Center, and she and Mulder head there, where they find Emily safe, but coming down with a fever. They find a greenish cyst on the back of Emily's neck. Later, when a nurse pierces the cyst with a needle, green liquid comes out, causing her to become gravely ill. Emily appears unaffected. Mulder believes that Emily has the same body chemistry that they have seen before with alien-human hybrids.
Dr. Calderon, working for a company called Prangen and Emily's doctor, refuses to transfer Emily's medical records to the County Children's Center, causing Mulder to visit him and rough him up when he refuses to do anything. Later Mulder follows Calderon after he leaves his office. Scully has imaging tests conducted on Emily. Calderon goes to see the Dark Suited Men, one of whom kills him by stabbing him in the neck with a stiletto. Both men morph into Calderon. Mulder follows as one of them leaves. The results of Emily's tests show her to be suffering from a tumorous infection. The other Calderon arrives at the hospital and injects Emily with an unknown green substance. He escapes by morphing into someone else. Scully believes that he is trying to continue the treatments and that the Sims were murdered because they were trying to stop him. Mulder heads to a building he saw Calderon enter, where he meets Anna Fugazzi, an elderly woman in a nursing home.
The doctor tells Scully that Emily is getting worse. A woman from the adoption agency arrives and wants to stop Scully from making decisions for Emily. Mulder connects the names of the women in the nursing home to recent births and finds that Dr. Calderon was treating them. Emily suffers from a terrible reaction after being placed in a hyperbaric oxygen chamber. Mulder finds medical records with Scully's name on them at the nursing home, along with a live fetus in a refrigerated chamber. Mulder finds Calderon entering soon after, and Detective Kresge arrives as well. Mulder and Kresge confront Calderon, and Calderon attacks Kresge. Kresge reacts to the attack by aiming his gun at Calderon. Mulder warns Kresge not to shoot Calderon, but he does not abide. Calderon's gunshot wounds cause him to spew green blood which incapacitates Kresge. Mulder quickly leaves the building to avoid being affected by the blood. Calderon morphs into Kresge, and deceives Mulder and escapes. Mulder returns to the hospital, where Emily has gone into a coma. Days later Emily has died. Mulder visits Scully at the funeral chapel, telling her that Kresge is recovering and all evidence at the nursing home and Prangen is gone. The only evidence left is Emily's body, but the agents instead find sand bags in her coffin along with Scully's cross necklace, which she had previously given to Emily.
Read more about this topic: Emily (The X-Files)
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