DNA Extraction
DNA isolation is a routine procedure to collect DNA for subsequent molecular or forensic analysis. There are three basic and two optional steps in a DNA extraction:
- Breaking the cells open, commonly referred to as cell disruption or cell lysis, to expose the DNA within. This is commonly achieved by chemical and physical methods-blending, grinding or sonicating the sample.
- Removing membrane lipids by adding a detergent or surfactants.
- Removing proteins by adding a protease (optional but almost always done).
- Removing RNA by adding an RNase (often done).
- Precipitating the DNA with an alcohol — usually ice-cold ethanol or isopropanol. Since DNA is insoluble in these alcohols, it will aggregate together, giving a pellet upon centrifugation. This step also removes alcohol-soluble salt. See ethanol precipitation.
Refinements of the technique include adding a chelating agent to sequester divalent cations such as Mg2+ and Ca2+, which prevents enzymes like DNase from degrading the DNA.
Cellular and histone proteins bound to the DNA can be removed either by adding a protease or by having precipitated the proteins with sodium or ammonium acetate, or extracted them with a phenol-chloroform mixture prior to the DNA-precipitation.
If desired, the DNA can be resolubilized in a slightly alkaline buffer or in ultra-pure water.
Read more about DNA Extraction: Special Types of DNA Extractions, Detecting DNA
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