Coyote Creek (Santa Clara County) - Habitat and Wildlife

Habitat and Wildlife

Coyote Creek has historically, and still does support the most diverse fish fauna among the Santa Clara Valley Basin watersheds. It supports 10 to 11 native fish species out of the original 18. Species known to occur currently include Pacific lamprey (Lampetra tridentata), steelhead/resident rainbow trout (Oncorhynchus mykiss), chinook salmon (Oncorhynchus tshawytscha), California roach, Hitch (Lavinia exilicauda), Sacramento blackfish (Orthodon microlepidotus), Sacramento pikeminnow, Sacramento sucker, three-spined stickleback, prickly sculpin (Cottus asper), riffle sculpin (Cottus gulosus), staghorn sculpin, and tule perch (Hysterocarpus traskii). Three species, the thicktail chub, splittail, and Sacramento perch have been extirpated from the drainage; the thicktail chub is extinct.

A 1962 report indicated that Coyote Creek, from its mouth to the headwaters in Henry Coe State Park, was an historical migration route for steelhead trout. SCVWD studies have shown that Standish Dam and percolation ponds have posed barriers to outmigrating trout. Based on these results, Standish Dam has not been installed since 2000. The on-channel percolation ponds constructed on Coyote Creek severely degrade steelhead habitat by harboring non-native fish predators, such as largemouth bass (Micropterus salmoides) which prey on salmonid fingerlings, and also by releasing warm water flows. Moving Ogier Ponds and Metcalf Percolation Ponds off-channel would significantly enhance rearing habitat for steelhead.

Coho salmon (Oncorhynchus kisutch) were present in the Coyote Creek watershed until the 1950s, suggesting that some spawning and rearing habitat was located in the watershed downstream from Coyote Reservoir which was completed in 1936 (blocking access to 310 square kilometers of upstream watershed). Historically, suitable habitat for coho salmon in the Coyote Creek watershed was likely restricted to the San Felipe Creek and Upper Penitencia Creek watersheds and possibly perennial reaches of Coyote Creek, and a few spring-fed tributaries upstream from Gilroy Hot Springs. Assuming the Coyote Percolation Reservoir was not a complete barrier to coho salmon; the construction of Anderson Dam in 1950 would have eliminated any coho salmon that occurred in the San Felipe Creek watershed that now flows into Anderson Reservoir. However, if the Coyote Creek Percolation Reservoir were a migration barrier, then only Upper Penitencia Creek would have provided suitable habitat for coho salmon after 1934. San Felipe Creek currently contains habitat potentially suitable to coho salmon with low stream temperatures related to cool groundwater discharges in the Calaveras Fault zone. During early June and late-July 1997, the senior author recorded water temperatures within the San Felipe Creek watershed within pools containing rainbow trout between 11-13.3°C and 14.4-17.7°C, respectively. Zones of groundwater discharge along the Calaveras Fault zone that traverses the watershed maintain cool summer water temperatures. Upper Penitencia Creek, which enters lower Coyote Creek near its mouth and drains the steep coastal hills to the east also may have contained suitable coho salmon habitat.

The Chinook salmon run in Coyote Creek may be the last viable run in the South Bay, since the breeding salmon in the Guadalupe River have severely declined subsequent to installation of extensive concrete channels in the river in downtown San Jose, California by the SCVWD. These are “fall run” fish primarily adapted to the Sacramento and San Joaquin River watersheds. Since chinook salmon spawn in early winter and juveniles migrate to the ocean in their first spring, they are able to use habitats that turn very warm or have low water quality in summer.

Historically, Golden beaver (Castor canadensis subauratus) lived in Coyote Creek. This report is consistent with Alexander R. McLeod's report on the progress of the first Hudson's Bay Company fur brigade sent to California in 1829, "Beaver is become an article of traffic on the Coast as at the Mission of St. Joseph alone upwards of Fifteen hundred Beaver Skins were collected from the natives at a trifling value and sold to Ships at 3 Dollars". Physical proof of Golden beaver in south San Francisco Bay tributaries is a Castor canadensis subauratus skull in the Smithsonian Institution National Museum of Natural History collected by zoologist James Graham Cooper in Santa Clara, California on Dec. 31, 1855.

A 1995 study showed high levels of toxic substances in receiving waters and sediments along urban areas of the creek versus undeveloped areas. This correlates to the density of storm drains suggesting that the pollution is from urban run-off.