Archaeopteryx is an interactive computer software program, written in Java, for viewing, editing, and analyzing phylogenetic trees. This type of program can be used for a variety of analyses of molecular data sets, but is particularly designed for phylogenomics. Besides tree description formats with limited expressiveness (such as Newick/New Hamphshire, Nexus), ATV also implements the phyloXML format. Archaeopteryx is the successor to the tree viewer ATV.
Famous quotes containing the word tree:
“The problems of the world, AIDS, cancer, nuclear war, pollution, are, finally, no more solvable than the problem of a tree which has borne fruit: the apples are overripe and they are falling—what can be done?... Nothing can be done, and nothing needs to be done. Something is being done—the organism is preparing to rest.”
—David Mamet (b. 1947)